ImagingPath
ORCA labeling of 44 SEs combined with RNA-FISH

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Sequential RNA FISH for nascent transcription of genes combined with ORCA labeling for 44 SEs

   May 21st, 2024 at 5:52pm

Details

experiment_type 
RNA FISH
aliases 
  1. alistair-boettiger-lab:imaging_rna_path
file_reference 
  1. 4DNFI95UKD9I.bed.gz
  2. no view permissions
  3. 4DNFIXT8Q9JW.csv
labeled_probe 
imaging oligos
labels 
  1. Cy5
other_probes 
  1. oligo probe library
  2. readout oligo library
override_display_title 
ORCA labeling of 44 SEs combined with RNA-FISH
public_release 
June 5th, 2024
target 
  1. Tbx5 mouse transcript
  2. Tbx5 mouse transcript
  3. Tbx3 mouse transcript
  4. Tbx3 mouse transcript
  5. Fgf8 mouse transcript
  6. Fgf5 mouse transcript
  7. Fgf5 mouse transcript
  8. Myc mouse transcript
  9. Myc mouse transcript
  10. Nanog mouse transcript
  11. Nanog mouse transcript
  12. Sox2 mouse transcript
  13. Ccna2 mouse transcript
  14. Ccna2 mouse transcript
  15. Ccnb1 mouse transcript
  16. Ccnb1 mouse transcript
  17. Ccnb2 mouse transcript
  18. Ccnb2 mouse transcript
  19. Cdt1 mouse transcript
  20. Cdt1 mouse transcript
  21. Gmnn mouse transcript