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File4DNFIM51DPAS
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An hdf5 file containing feature-barcode matrices generated by the 10X genomics cell ranger pipeline. Each element of the matrix is the number of UMIs associated with a feature (row) and a barcode (column). The matrices provided have been filtered to remove background and contain only detected cell associated barcodes. More information can be found here: https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger

   June 4th, 2021 at 3:05pm

QC and metrics for this file produced by the 10X genomics cell ranger pipeline  

NOTE The report available here contains information that can be used to evaluate the quality of the single cell RNA-seq results available in this file.

Note(s)  

This file contains processed results performed outside of the 4DN-DCIC standardized pipelines. The file and the information about its provenance, i.e. which files were used as input to generate this output was provided by or done in collaboration with the lab that did the experiments to generate the raw data. For more information about the specific analysis performed, please contact the submitting lab or refer to the relevant publication if available.

Properties  

File Format 
hdf5
File Type 
Filtered Feature-barcode Matrices
General Classification 
Processed File
(Supplementary)
File Size 
13.91 MB
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