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File4DNFIDUYHPWU
released
View JSON

This is an output file of the Hi-C processing pipeline

   June 30th, 2020 at 8:04am

Properties  

File Format 
bam
File Type 
Alignments
General Classification 
Processed File
File Size 
61.61 GB
  Download

More Information

Quality Metric Summary 
Total Reads
687.64m
Unmapped Reads
4.597%
Multimapped Reads
21.019%
Duplicate Reads
9.603%
Walks
0.004%
Minor Contigs
0.153%

1 Experiment Set

Title
Set Type
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
4DNESW1SPPTD
Replicate
Micro-C
H1-hESC (Tier 1) differentiated to definitive endoderm
Micro-C on H1-DE cells - protocol variations
Formaldehyde+DSG, H1-DE (Tier 1)
Enzyme
MNase
Job Dekker, UMMS

Micro-C experiments on H1 derived endoderm, differentiated using the 4DN protocol.

Lab:
Job Dekker, UMMS
Publication:
None

32 Raw Files

22 Processed Files

4 Supplementary Files

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