FileProcessed

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File4DNFI9G526S3
released
View JSON

This is an output file of the Hi-C processing pipeline

   September 21st, 2022 at 12:26am

Properties  

File Format 
pairs
File Type 
Contact List-combined
General Classification 
Processed File
File Size 
3.19 GB
  Download

More Information

Quality Metric Summary 
Filtered Reads
176.51m
Cis reads (>20kb)
37.079%
Short cis reads
45.605%
Trans Reads
17.316%

1 Experiment Set

Title
Set Type
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
4DNES8R5RDVD
Replicate
DNase Hi-C
RUES2
DNase Hi-C on human iPSCs differentiated to endothelium
undifferentiated - day 0
Enzyme
DNaseI
Chuck Murry, UW

DNase Hi-C on RUES2 iPSC cells - day 0 undifferentiated

Lab:
Chuck Murry, UW
Publication:
Alavattam KG et al. (2022) PMID:36493778

12 Raw Files

10 Processed Files

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