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Project
Experiment Type
Assay Details
Biosource
File Properties
File Type
File Format
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Generating Lab
Experimental Lab
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Output of Workflow
Status
2 Common Properties
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Title
Type
Experiment Type
Dataset
Condition
Assay Details
Biosource
File Type
File Format
In experiment as
Replicate info
Generating Lab
Experimental Lab
File Size
Experiment Set
FileProcessed
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 11
HindIII
skin fibroblast
Alignments
bam
processed file
Biorep 1, Techrep 1
26.08 GB
FileProcessed
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 30
DdeI and DpnII
skin fibroblast
Alignments
bam
processed file
Biorep 1, Techrep 1
30.7 GB
FileProcessed
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 15
DdeI and DpnII
skin fibroblast
Alignments
bam
processed file
Biorep 1, Techrep 1
24.71 GB
FileProcessed
-
-
-
-
-
Intermediate File
bam
-
-
-
35.48 GB
-
FileProcessed
-
-
-
-
-
Intermediate File
bam
-
-
-
32.58 GB
-
FileProcessed
-
-
-
-
-
Intermediate File
bam
-
-
-
39.17 GB
-
FileFastq
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 30
DdeI and DpnII
skin fibroblast
Reads
fastq
raw file
Biorep 1, Techrep 1
11.2 GB
-
FileFastq
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 30
DdeI and DpnII
skin fibroblast
Reads
fastq
raw file
Biorep 1, Techrep 1
10.63 GB
-
FileFastq
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 15
DdeI and DpnII
skin fibroblast
Reads
fastq
raw file
Biorep 1, Techrep 1
9.45 GB
-
FileFastq
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 15
DdeI and DpnII
skin fibroblast
Reads
fastq
raw file
Biorep 1, Techrep 1
9.07 GB
-
FileFastq
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 11
HindIII
skin fibroblast
Reads
fastq
raw file
Biorep 1, Techrep 1
10.97 GB
-
FileFastq
in situ Hi-C
Hi-C 3.0 on progeria patient cultured primary fibroblasts
passage 11
HindIII
skin fibroblast
Reads
fastq
raw file
Biorep 1, Techrep 1
10.09 GB
-
FileProcessed
TSA-seq
TSA-seq v2 Lamin B1 in k562
condition2 - conditionAI - anti-Lamin B1
LMNB1 protein
K562 (Tier 2)
Normalized Counts
bw
processed file
Biorep 2, Techrep 1
1.06 MB
FileProcessed
TSA-seq
TSA-seq v2 Lamin B1 in k562
condition2 - conditionAI - anti-Lamin B1
LMNB1 protein
K562 (Tier 2)
Normalized Counts
bw
processed file
Biorep 1, Techrep 1
1.06 MB
FileReference
-
-
-
-
-
Target Regions
bed
-
-
-
18.68 kB
-
FileReference
-
-
-
-
-
Other Library Files
zip
-
-
-
11.48 MB
-
FileReference
-
-
-
-
-
Other Library Files
zip
-
-
-
11.27 MB
-
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - Cell Data
csv
processed file
Biorep 4, Techrep 1
17.05 MB
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - Spot Demultiplexing
csv
processed file
Biorep 4, Techrep 1
6.42 GB
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - DNA-spot/trace Core
csv
processed file
Biorep 4, Techrep 1
1.63 GB
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - Cell Data
csv
processed file
Biorep 3, Techrep 1
19.46 MB
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - Spot Demultiplexing
csv
processed file
Biorep 3, Techrep 1
6.47 GB
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - DNA-spot/trace Core
csv
processed file
Biorep 3, Techrep 1
1.31 GB
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - Cell Data
csv
processed file
Biorep 2, Techrep 1
17.66 MB
FileProcessed
multiplexed FISH
Chromatin tracing in mouse primary motor cortex
Mouse primary motor cortex - mecp2 KO
2000 loci (mouse), Chromosomes, MOp RNA-MERFISH (mouse), Mecp2 mouse protein
primary motor cortex
FOF-CT - Spot Demultiplexing
csv
processed file
Biorep 2, Techrep 1
9.15 GB