ExperimentHiC sci-Hi-C on IMR-90 (Tier 1) with DpnII

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

sci-Hi-C4DNEXUDB9U31
released
View JSON

sciHi-C on a mixture of IMR90 and HAP1 cells (IMR90 cells rep 1)

   October 11th, 2018 at 11:04pm
Source Publication
Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data.
Kim HJ, Yardimci GG, et al., PLoS computational biology 2020

Properties  

Experiment Type 
sci-Hi-C
Follows SOP 
Yes
Biosample 
4DNBSXFI8X8X
Digestion Enzyme 
DpnII
Biosample Modifications 
None
Biosample Treatments 
None
Biosample Biosource 
IMR-90 (Tier 1) - 4DNSRI51KRED

Experiment SetOpen In Search View