Experiment Set

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4DNES5Y9NNCL
released

Custom Set: HUVEC dilution Hi-C

   April 9th, 2017 at 5:34pm

Assay Description  



Experiment Set Properties  


Set Type 
Custom
Organism 
Sample Type 
primary cells
Sample 
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: HindIII

2 Processed Files

Experiment
File
File Type
File Size
alignments (bam)
25.48 GB
contact list-replicate (pairs)
2.33 GB

Quality Metrics

Experiment
For File
Total Reads
Unmapped Reads
Multimapped Reads
Duplicate Reads
Walks
Minor Contigs
Details
File
Alignments (bam)
4DNFI7MQRZXO
160.71m
5.569%
10.391%
0.906%
1.478%
0.169%
Experiment
For File
Filtered Reads
Cis reads (>20kb)
Short cis reads
Trans Reads
Details
File
Contact List-replicate (pairs)
4DNFIIO9OYD9
131.22m
51.511%
28.836%
19.653%