ExperimentSetReplicate

ExperimentSet4DNES5HCFFZ2
replaced
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Replicates of CUT&RUN on H1 cells using H3K27ac (ab4729) with a digestion time of 9min

   February 23rd, 2018 at 8:44am

Note: Replaced Item - 4DNES5HCFFZ2  

This experiment set was replaced by 4DNES33LF165 because existing sets from the same line and using the same antibody that differed only in reaction time (a variable determined to not qualitatively affect the results) were merged into a single replicate set.

Data Usage Guidelines  

Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
stem cells
Sample 
H1-hESC (Tier 1)
Experiment Type(s) 
CUT&RUN
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: H3K27ac

2 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEX2N5KGJB
Bio Rep 1, Tec Rep 1
CUT&RUN against H3K27ac on H1-hESC (Tier 1)
File
4DNFI25FMO4V
read positions (bam)
3.49 GB
File
no view permissions
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