ExperimentSetReplicate

ExperimentSet4DNESX18HS2V
replaced

Replicates of CTCF enriched ChIA-Drop on GM12878 cells.

   December 16th, 2019 at 11:02pm

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.

Note: Replaced Item - 4DNESX18HS2V  


This experiment set was replaced by 4DNESQR3D9XM because new biological replicates were added.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
immortalized cells
Sample 
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: CTCF protein

18 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSD3GZLVN
Bio Replicate 1
Experiment
4DNEX39Z23EF
Tech Replicate 1
Pair
4.54 GB
151
  Pass
51.7m
4.87 GB
151
  Pass
51.7m
Biosample
4DNBSCNGGH83
Bio Replicate 2
Experiment
4DNEX65BOAKM
Tech Replicate 1
Pair
7.35 GB
151
  Pass
83.8m
8.12 GB
151
  Pass
83.8m
Biosample
4DNBSNOGVYAB
Bio Replicate 3
Experiment
4DNEX2FMPU1P
Tech Replicate 1
Pair
5.83 GB
151
  Pass
69.46m
6.43 GB
151
  Pass
69.46m
Show 6 More Biosamples with 6 Experiments