ExperimentSetReplicate

ExperimentSet4DNESZRR3F5W
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Additional set of RNA-seq experiments on cerebellar granule neurons with control vector isolated using FANS at day 8 after in vivo electroporation from dCas9-KRAB mouse postnatal day 14 - used as control for Etv1 rescue and Ubash3b enhancer KD

   August 5th, 2025 at 7:34pm

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
cerebellar granule neuron - 8 days old
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

30 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXLJN39RM
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIQKBBX7J
27.96m
27.31m
Experiment
4DNEX1RVEY9G
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIR84F86M
21.25m
20.77m
Experiment
4DNEXWWFWKSM
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIKGH9ALX
41.56m
40.69m
Experiment
4DNEX883L8YY
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFI463U6JO
22.04m
21.6m
Experiment
4DNEXF1KLQU8
Bio Rep 5, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFI1V98C88
29.79m
29.15m
Experiment
4DNEXHZU1NLV
Bio Rep 6, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIEWDG99U
38.52m
37.68m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXLJN39RM
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFILC8W13T
9.23m
134.51k
Experiment
4DNEX1RVEY9G
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIVAAF9U5
7.2m
32.16k
Experiment
4DNEXWWFWKSM
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFI9ELO2CL
13.12m
73.62k
Experiment
4DNEX883L8YY
Bio Rep 4, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFI1WIRML4
7.16m
19.37k
Experiment
4DNEXF1KLQU8
Bio Rep 5, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFI4E6YGKZ
9.48m
33.86k
Experiment
4DNEXHZU1NLV
Bio Rep 6, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIQ19MJ96
13.76m
58.48k