ExperimentSetReplicate

ExperimentSet4DNESZK1WOO7
released
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Multiplexed FISH of 14 TADs in chromosome I in mutant (cec4-mutant RB2301 strain) in C. elegans.

   April 8th, 2025 at 4:16pm
Source Publication
Lamina-Dependent Stretching and Unconventional Chromosome Compartments in Early C. elegans Embryos.
Sawh AN, Shafer MER, et al., Molecular cell 2020

Note on FOF-CT file format  

Experiment Set Properties  

Set Type 
Replicate
Organism 
C. elegans
Sample Type 
whole organisms
Sample 
multicellular organism
Experiment Type(s) 
multiplexed FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: 14 TADs on ChrI (roundworm)
Channel
Imaging Rounds
Path
 
ch00
-
DAPI
ch01
-
fiducial beads
ch02
1-7
7 TADs on ChrI imaged using ATTO 561 imaging probes
ch03
1-7
7 TADs on ChrI imaged using Alexa Fluor 647 imaging probes

1 Processed File

Experiment
File
File Type
File Size
Experiment
4DNEXLOYS511
Bio Rep 1, Tec Rep 1
multiplexed FISH on multicellular organism
File
4DNFIZ6HO73N
FOF-CT - DNA-spot/trace core (csv)
359.89 kB