ExperimentSetReplicate

ExperimentSet4DNESYIVVMOC
released
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Replicates of P16_S fraction ReReplicates of Pliseq on H1-hESC Tier 1 cells - cells were grown, BrdU labeled and FACS sorted

   March 21st, 2019 at 8:42pm
Source Publication
High-resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells.
Zhao PA, Sasaki T, et al., Genome biology 2020

Note: Replaced Item - 4DNESYIVVMOC  

This experiment set supercedes 4DNESJOH66ZZ because a new biological replicate was added.

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
stem cells
Sample 
H1-hESC (Tier 1)
Experiment Type(s) 
Multi-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: P16 of 16 fractions

4 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEXYX58PCM
Bio Rep 1, Tec Rep 1
Multi-stage Repli-seq on H1-hESC (Tier 1) S-phase P16
File
Alignments (bam)
4DNFIZKC814T
15.63m
10.445%
Experiment
4DNEX28OSAGW
Bio Rep 2, Tec Rep 1
Multi-stage Repli-seq on H1-hESC (Tier 1) S-phase P16
File
Alignments (bam)
4DNFIU7OAWNV
19.97m
8.657%