ExperimentSetReplicate

ExperimentSet4DNESYIGHU84
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RNA FISH of Hbb-b1 and Prdx2 intronic regions on 4h differentiated cells

   September 14th, 2018 at 4:58pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Target: Chromosomes, GRCm38:7:103826534-103827928 mouse region, GRCm38:8:84969622-84974811 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:7:103826534-103827928 mouse region targeted by Alexa Fluor 594-labeled custom oligos
ch02
GRCm38:8:84969622-84974811 mouse region targeted by Cy5-labeled custom oligos

8 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEX16P4X2R
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIQOYB7QO
csv
29.68 kB
File
4DNFIZI4KTFG
coordinates (csv)
5.47 kB
File
4DNFIE8Z5KQ4
csv
33.41 kB
File
4DNFI6OGUZR2
coordinates (csv)
6.53 kB
Experiment
4DNEXI6KPK7G
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIKRVSWL5
csv
51.21 kB
File
4DNFI263LDHA
coordinates (csv)
10.44 kB
File
4DNFIHS2FHSA
csv
50.62 kB
File
4DNFIMMOZOJU
coordinates (csv)
9.88 kB