ExperimentSetReplicate

ExperimentSet4DNESYETN13G
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single nucleus Hi-C on maternal pronuclei from G2 wildtype zygote

   June 22nd, 2018 at 5:38pm
Source Publication
A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
Gassler J, Brandao HB, et al., The EMBO journal 2017

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
animal zygote
Experiment Type(s) 
sn-Hi-C
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

42 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBS8ZXE2RX
Bio Replicate 1
Experiment
4DNEXDWA2KWF
Tech Replicate 1
Pair
File
4DNFIWZMDLHL
1.09 GB
125
  Pass
18.35m
File
4DNFI5O63JEA
1.11 GB
125
  Pass
18.35m
Biosample
4DNBSJ5RHNHB
Bio Replicate 2
Experiment
4DNEXY3XFGOF
Tech Replicate 1
Pair 1
File
4DNFIDXN2TJ6
622.35 MB
125
  Pass
10.43m
File
4DNFITFH4I45
615.29 MB
125
  Pass
10.43m
Pair 2
File
4DNFIUYF449D
1.32 GB
125
  Pass
20.77m
File
4DNFIEQRBC9N
1.33 GB
125
  Pass
20.77m
Biosample
4DNBSVRDSYFA
Bio Replicate 3
Experiment
4DNEXMTGWNUV
Tech Replicate 1
Pair 1
File
4DNFIU4ANK2F
1.18 GB
125
  Pass
21.45m
File
4DNFIZ8RLHON
1.19 GB
125
  Pass
21.45m
Pair 2
File
4DNFI2MSVXJ1
1.25 GB
125
  Pass
20.63m
File
4DNFILJ8XPQZ
1.28 GB
125
  Pass
20.63m
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