ExperimentSetReplicate

ExperimentSet4DNESXR4J4MS
released
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RNA-seq on RUES2 iPSC cells - differentiation day 2 mesoderm

   September 19th, 2022 at 4:13pm
Source Publication
Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiation.
Alavattam KG, Mitzelfelt KA, et al., Stem cell reports 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
RUES2 differentiated to mesoderm
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXNQUX8R8
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2 differentiated to mesoderm
File
Read Positions (bam)
4DNFIA5IES7O
72.39m
59.94m
Experiment
4DNEXV26Q4OX
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2 differentiated to mesoderm
File
Read Positions (bam)
4DNFIL78I9HR
65.62m
53.81m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXNQUX8R8
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2 differentiated to mesoderm
File
Gene Expression (tsv)
4DNFIKGVXB8P
89.22m
92.72k
Experiment
4DNEXV26Q4OX
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2 differentiated to mesoderm
File
Gene Expression (tsv)
4DNFIEDF987X
78.94m
52.31k