ExperimentSetReplicate

ExperimentSet4DNESX5J3Q77
released
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ChIP-seq input on C57BL/6NCrl embryonic day 12.5 mouse midbrain

   April 24th, 2022 at 12:11am
Source Publication
Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues.
Yu M, Zemke NR, et al., Nature structural & molecular biology 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
tissue
Sample 
midbrain
Experiment Type(s) 
ChIP-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: None (Control)

1 Processed File

Experiment
File
File Type
File Size
Experiment
4DNEXZZTYSG2
Bio Rep 1, Tec Rep 1
ChIP-seq on midbrain
File
4DNFIF3IRQR3
read positions (bed)
406.11 MB

Quality Metrics

Experiment
For File
PCR Bottleneck Coefficient (PBC)
Nonredundant Read Fraction (NRF)
Filtered & Deduped Reads
Details
Experiment
4DNEXZZTYSG2
Bio Rep 1, Tec Rep 1
ChIP-seq on midbrain
File
Read Positions (bed)
4DNFIF3IRQR3
0.87
0.87
24.11m