ExperimentSetReplicate

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

ExperimentSet4DNESX5HGYTY
released
View JSON

Set of Input for DDX18 TSA-seq Reaction Condition C (PBS 50% Sucrose, 1:3000 tyramide biotin) 30 minute reaction on HCT116 cells

   November 2nd, 2021 at 7:42pm
Source Publication
Nucleolus and centromere Tyramide Signal Amplification-Seq reveals variable localization of heterochromatin in different cell types.
Kumar P, Gholamalamdari O, et al., Communications biology 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HCT116 (Tier 2)
Experiment Type(s) 
TSA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: DDX18 protein

1 Raw File

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSKRLQJMM
Bio Replicate 1
Experiment
4DNEX5KLZC5O
Tech Replicate 1
File
File
4DNFIADJ9A7D
1.58 GB
100
  Pass
35.75m