ExperimentSetReplicate

ExperimentSet4DNESWQO1AL4
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RNA FISH of Zfpm1 and Slc25a37 intronic regions in G1E-ER4 cells differentiated for 24 hours

   September 14th, 2018 at 4:59pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Target: Chromosomes, GRCm38:8:122282141-122337247 mouse region, GRCm38:14:69241851-69285103 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:8:122282141-122337247 mouse region targeted by Alexa Fluor 594-labeled custom oligos
ch02
GRCm38:14:69241851-69285103 mouse region targeted by Cy3-labeled custom oligos

8 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXAA5TCLR
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIGVKBO5Y
csv
44.59 kB
File
4DNFIT5G1TH7
coordinates (csv)
15.54 kB
File
4DNFIVH9IJAR
csv
29.7 kB
File
4DNFI7CUIWG8
coordinates (csv)
8.37 kB
Experiment
4DNEXZAF4DBI
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFI123UU27
csv
34.27 kB
File
4DNFIZ3BL17Y
coordinates (csv)
11.55 kB
File
4DNFIB91AMOH
csv
23.83 kB
File
4DNFICDLEN2U
coordinates (csv)
6.93 kB