ExperimentSetReplicate

ExperimentSet4DNESWN8KFCA
released
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SLAM-seq on 60 min post mitotic release DMSO treated dTAG-NIPBL clone D7 - 15 min 4sU labeling

   October 18th, 2024 at 2:36pm
Source Publication
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay TM, Pant A, et al., bioRxiv 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
dTAG-NIPBL hTERT-RPE-1 - clone D7
Experiment Type(s) 
SLAM-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
None

8 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSHSBY4EO
Bio Replicate 1
Experiment
4DNEX47H6BEK
Tech Replicate 1
Pair
File
4DNFICKTGSO5
7.89 GB
101
  Pass
161.89m
File
4DNFIMQBKZ5T
8.11 GB
101
  Pass
161.89m
Biosample
4DNBS1NY67AN
Bio Replicate 2
Experiment
4DNEXO85XE2Y
Tech Replicate 1
Pair
File
4DNFIM1QRVJ9
5.37 GB
101
  Pass
110.25m
File
4DNFIK8HFBED
5.48 GB
101
  Pass
110.25m
Biosample
4DNBSQZ5CNTE
Bio Replicate 3
Experiment
4DNEXVGUOBD5
Tech Replicate 1
Pair
File
4DNFILU1A9Y2
7.05 GB
101
  Pass
146.24m
File
4DNFIXVILQWS
7.12 GB
101
  Pass
146.24m
Biosample
4DNBS23C78HH
Bio Replicate 4
Experiment
4DNEX3UUS4KQ
Tech Replicate 1
Pair
File
4DNFITI7RESX
6.92 GB
101
  Pass
142.55m
File
4DNFIML9JC9B
7.04 GB
101
  Pass
142.55m