ExperimentSetReplicate

ExperimentSet4DNESVIKXE89
released
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RNA-seq on RUES2 iPSC cells - differentiation day 6 endothelial cell progenitors

   September 19th, 2022 at 4:13pm
Source Publication
Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiation.
Alavattam KG, Mitzelfelt KA, et al., Stem cell reports 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
RUES2 differentiated to endothelial progenitor cell
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEX58A4SPS
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial progenitor cell
File
Read Positions (bam)
4DNFIL6FSV9V
66.09m
55.23m
Experiment
4DNEXI4ZEEMG
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial progenitor cell
File
Read Positions (bam)
4DNFIEAAXDFI
62.29m
54.75m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEX58A4SPS
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial progenitor cell
File
Gene Expression (tsv)
4DNFIAD8UX3B
78.78m
49.93k
Experiment
4DNEXI4ZEEMG
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial progenitor cell
File
Gene Expression (tsv)
4DNFIY5EPU2L
74.89m
19.15k