ExperimentSetReplicate

ExperimentSet4DNESUVZSHI5
released

RNA-seq on cerebellum immunoprecipitated without electroporation from CD1 mouse postnatal day 10

   February 27th, 2024 at 5:32pm

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

12 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXEXRCRVX
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum - PND 10
File
Read Positions (bam)
4DNFI7E8UF5A
27.5m
26.03m
Experiment
4DNEX8TN159Z
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum - PND 10
File
Read Positions (bam)
4DNFI9AD6LG4
26.96m
25.49m
Experiment
4DNEXFAXOT1J
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum - PND 10
File
Read Positions (bam)
4DNFI8BEC9M4
27.18m
25.87m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXEXRCRVX
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellum - PND 10
File
Gene Expression (tsv)
4DNFIEZ92C51
25.15m
48.7k
Experiment
4DNEX8TN159Z
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellum - PND 10
File
Gene Expression (tsv)
4DNFITQIN12Z
28.29m
60.96k
Experiment
4DNEXFAXOT1J
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellum - PND 10
File
Gene Expression (tsv)
4DNFIBQICI4C
23.08m
40.76k