ExperimentSetReplicate

ExperimentSet4DNESUPMDA2K
released
View JSON

RNA FISH of Hbbb1 intronic regions in G1E-ER4 cells differentiated for 24 hours

   September 14th, 2018 at 4:59pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Target: Chromosomes, GRCm38:7:103826534-103827928 mouse region
Sample Image 
hbb-b1 probe with DAPI, control
View Image Item
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:7:103826534-103827928 mouse region targeted by Alexa Fluor 594-labeled custom oligos

6 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXIQZVDKP
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIPH2LTCQ
csv
24.27 kB
File
4DNFI122S5BU
coordinates (csv)
5.74 kB
Experiment
4DNEXINOO4HH
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIS11T5CP
csv
16.6 kB
File
4DNFIRJPXJHB
coordinates (csv)
5.17 kB
Experiment
4DNEXC999JI7
Bio Rep 3, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIRG3EIGA
csv
13.94 kB
File
4DNFIKOHKC6L
coordinates (csv)
3.46 kB