ExperimentSetReplicate

ExperimentSet4DNESUB2NR59
released

ATAC-seq on primary motor cortex from mouse - subsection 3C

   April 12th, 2024 at 11:40pm
Source Publication

Aggregated non-redundant peaks  


NOTE Non-redundant peaks aggregated from multiple donors in bed format is provided as a supplementary file. Peaks of a specific cell type are represented using different track colors which can be visualized using HiGlass. Additionally, a zipped folder containing individual bed files specific for each cell type is also provided. The information on track colors and associated cell type can be accessed via a key file here


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

27 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSSGS64TL
Bio Replicate 1
Experiment
4DNEXJPX3YDC
Tech Replicate 1
Grp 1
7.94 GB
101
  Pass
160.97m
8.03 GB
101
  Pass
160.97m
2.57 GB
24
  Pass
160.97m
Grp 2
9.08 GB
101
  Pass
188.34m
9.24 GB
101
  Pass
188.34m
2.94 GB
24
  Pass
188.34m
Grp 3
6.12 GB
101
  Pass
121.49m
6.26 GB
101
  Pass
121.49m
2 GB
24
  Pass
121.49m
Grp 4
6.1 GB
101
  Pass
121.33m
6.23 GB
101
  Pass
121.33m
1.98 GB
24
  Pass
121.33m
Grp 5
5.66 GB
101
  Pass
109.97m
5.96 GB
101
  Pass
109.97m
1.9 GB
24
  Pass
109.97m
Biosample
4DNBSQHLC48T
Bio Replicate 2
Experiment
4DNEX7RVXAV2
Tech Replicate 1
Grp 1
7.89 GB
101
  Pass
159.98m
8 GB
101
  Pass
159.98m
2.58 GB
24
  Pass
159.98m
Grp 2
8.98 GB
101
  Pass
186.21m
9.14 GB
101
  Pass
186.21m
2.94 GB
24
  Pass
186.21m
Grp 3
17.37 GB
101
  Pass
348.69m
17.79 GB
101
  Pass
348.69m
5.64 GB
24
  Pass
348.69m
Grp 4
17.35 GB
101
  Pass
349.05m
17.74 GB
101
  Pass
349.05m
5.62 GB
24
  Pass
349.05m