ExperimentSetReplicate

ExperimentSet4DNESTBMZ5SD
released
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DNA Paint on HFF Htert cells with 3 loci

   March 26th, 2018 at 9:12pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:4:151542617-151679223 region, GRCh38:4:151276234-151444375 region, GRCh38:4:152897610-153104002 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:4:151542617-151679223 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:4:151276234-151444375 region targeted by Alexa Fluor 488-labeled BAC
ch03
GRCh38:4:152897610-153104002 region targeted by Cy5-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESTBMZ5SD
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEX8RJNAS8
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIK9NRYI5
loci distances (txt)
67.62 kB
Experiment
4DNEXHBLW36B
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFI3LK9Z7Y
loci distances (txt)
95.38 kB
Experiment
4DNEX1LAZ7SD
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFI4NOQ162
loci distances (txt)
97.83 kB