ExperimentSetReplicate

ExperimentSet4DNESS9AS4J3
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SLAM-seq on 120 min post mitotic release DMSO treated dTAG-NIPBL clone D7 - 15 min 4sU labeling

   October 18th, 2024 at 2:36pm
Source Publication
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay TM, Pant A, et al., bioRxiv 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
dTAG-NIPBL hTERT-RPE-1 - clone D7
Experiment Type(s) 
SLAM-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
None

8 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSP4OZ22X
Bio Replicate 1
Experiment
4DNEXKFZAUFH
Tech Replicate 1
Pair
File
4DNFIHRFWJ7W
5.6 GB
101
  Pass
114.83m
File
4DNFIBSDYMQ2
5.67 GB
101
  Pass
114.83m
Biosample
4DNBS74BJVO1
Bio Replicate 2
Experiment
4DNEXT6L98DR
Tech Replicate 1
Pair
File
4DNFIEM51HN6
4.96 GB
101
  Pass
102.06m
File
4DNFIK9NZ9L1
5.14 GB
101
  Pass
102.06m
Biosample
4DNBSVUCAV1J
Bio Replicate 3
Experiment
4DNEX2G4V1KY
Tech Replicate 1
Pair
File
4DNFIHZT82KT
7.11 GB
101
  Pass
148.51m
File
4DNFI9FOBKUX
7.21 GB
101
  Pass
148.51m
Biosample
4DNBSYIYNI8R
Bio Replicate 4
Experiment
4DNEXOTZW2RK
Tech Replicate 1
Pair
File
4DNFIZAGPDS4
4.23 GB
101
  Pass
87.16m
File
4DNFIZTR6UZ5
4.31 GB
101
  Pass
87.16m