ExperimentSetReplicate

ExperimentSet4DNESRNRHHPX
released
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Hi-C in GFP+ expressing (green) homozygous mutant (Trp53 -/-) LUAD cells from K-MADM-Trp53 mouse

   May 27th, 2025 at 5:47pm
Source Publication
Tracing the evolution of single-cell cancer 3D genomes: an atlas for cancer gene discovery.
Liu M, Jin S, et al., bioRxiv : the preprint server for biology 2024

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
tissue
Sample 
lung
Experiment Type(s) 
in situ Hi-C
Modification Type 
Viral Transduction
Treatment Type 
None
Assay Details 
Enzyme: Arima - F1, A2, F3, F4

14 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSMGZZSXS
Bio Replicate 1
Experiment
4DNEX8N81INM
Tech Replicate 1
Pair 1
File
4DNFI9TD1GBU
986.46 MB
150
  Pass
16.53m
File
4DNFI6MGNIVG
1015.4 MB
150
  Pass
16.53m
Pair 2
File
4DNFIXYHSZOX
440.3 MB
150
  Pass
7.17m
File
4DNFIDBU4EF1
453.21 MB
150
  Pass
7.17m
Pair 3
File
4DNFIFCA3L8J
14.29 GB
150
  Pass
225.38m
File
4DNFIQPRL2KM
15.2 GB
150
  Pass
225.38m
Biosample
4DNBSLSSWQN9
Bio Replicate 2
Experiment
4DNEXPNWNXDD
Tech Replicate 1
Pair 1
File
4DNFI5DAF6HD
951.19 MB
150
  Pass
15.98m
File
4DNFIPVTRNV7
984.64 MB
150
  Pass
15.98m
Pair 2
File
4DNFIQRQIC8Y
453.42 MB
150
  Pass
7.38m
File
4DNFIABEBUPP
469.31 MB
150
  Pass
7.38m
Pair 3
File
4DNFIOJMIHYZ
3.96 GB
150
  Pass
67.91m
File
4DNFI33ZKIAV
4.23 GB
150
  Pass
67.91m
Pair 4
File
4DNFIYETN3A4
12.99 GB
150
  Pass
204m
File
4DNFI4ARX471
13.85 GB
150
  Pass
204m