ExperimentSetReplicate

ExperimentSet4DNESRGYU8ZK

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Replicates of P2_S fraction Repliseq on CTCF depleted HCT116 Rad21 AID-tagged cells - cells were grown, BrdU labeled and FACS sorted

March 10th, 2021 at 12:07am

Source Publication

Cohesin-mediated loop anchors confine the locations of human replication origins.

Emerson DJ, Zhao PA, et al., Nature 2022

Experiment Set Properties

Replicate

immortalized cells

HCT116 with Crispr generated mClover and AID-tagged RAD21

Multi-stage Repli-seq

None

Chemical

Fraction: P2 of 16 fractions

2 Processed Files

2 Raw Files

Provenance

Attribution

Details

Warnings

2 Processed Files

Quality Metrics

Experiment

For File

Total Aligned

Removed Duplicates

Details

Experiment

4DNEXXULAE8E

Bio Rep 1, Tec Rep 1

Multi-stage Repli-seq on HCT116 with Crispr generated mClover and AID-tagged RAD21 S-phase P2

File

Alignments (bam)

89.38m

0.0%