ExperimentSetReplicate

ExperimentSet4DNESQIDKLL7
released

ATAC-seq on Embryonic stem cells (ESC) from mouse (New)

   December 4th, 2023 at 7:38pm

Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
stem cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

5 Processed Files

Quality Metrics

Experiment
For File
Percent mitochondrial reads
Nonredundant Read Fraction (NRF)
PCR Bottleneck Coefficient (PBC)
Filtered & Deduped Reads
Report
Details
Experiment
4DNEXOE4JE1I
Bio Rep 1, Tec Rep 1
ATAC-seq on mouse embryonic stem cell
File
Read Positions (bed)
4DNFINUVX11G
8.41%
0.64
0.66
24.12m
Experiment
4DNEX8MI3COP
Bio Rep 2, Tec Rep 1
ATAC-seq on mouse embryonic stem cell
File
Read Positions (bed)
4DNFIHPMW6XE
8.32%
0.66
0.69
24.47m
Experiment
For File
Optimal Peaks
Rescue Ratio
Self Consistency Ratio
Fraction of Reads in Peaks
Report
Details
From Multiple Experiments
4DNESQIDKLL7
Multiple Experiments
File
Peaks (bigbed)
4DNFIAEQI3RP
197.45k
1.0
1.01
0.47