ExperimentSetReplicate

ExperimentSet4DNESQBLYI8N
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single nucleus Hi-C on maternal pronuclei from Wapl deletion

   June 22nd, 2018 at 5:38pm
Source Publication
A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
Gassler J, Brandao HB, et al., The EMBO journal 2017

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
animal zygote with Wapl deletion
Experiment Type(s) 
sn-Hi-C
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

46 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSL82YWZK
Bio Replicate 1
Experiment
4DNEXO3LW1EV
Tech Replicate 1
Pair
File
4DNFIEPCDCI2
1.23 GB
125
  Pass
20.44m
File
4DNFIPBJTSSK
1.26 GB
125
  Pass
20.44m
Biosample
4DNBSUQVYSMQ
Bio Replicate 2
Experiment
4DNEXMPZM335
Tech Replicate 1
Pair
File
4DNFIF6T6ZLC
1.14 GB
125
  Pass
19.21m
File
4DNFIEWUALVY
1.15 GB
125
  Pass
19.21m
Biosample
4DNBSJYABYQ7
Bio Replicate 3
Experiment
4DNEXX6TAFRM
Tech Replicate 1
Pair
File
4DNFILN2DCSB
1.19 GB
125
  Pass
19.67m
File
4DNFI7NAHIN4
1.2 GB
125
  Pass
19.67m
Show 5 More Biosamples with 5 Experiments