ExperimentSetReplicate

ExperimentSet4DNESPZC9M42
released
View JSON

ChIP-seq in HCT116-RAD-mAC using antibody RAD21 treated with auxin-12h

   June 28th, 2024 at 5:23pm
Source Publication
Multifaceted roles of cohesin in regulating transcriptional loops.
Kim M, Wang P, et al., bioRxiv : the preprint server for biology 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HCT116 (Tier 2)
Experiment Type(s) 
ChIP-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Target: RAD21

4 Processed Files

Quality Metrics

Experiment
For File
PCR Bottleneck Coefficient (PBC)
Nonredundant Read Fraction (NRF)
Filtered & Deduped Reads
Report
Details
Experiment
4DNEX1KMBF9K
Bio Rep 1, Tec Rep 1
ChIP-seq against RAD21 on HCT116 (Tier 2)
File
Read Positions (bed)
4DNFIKSV7NC4
0.55
0.56
47.98m