ExperimentSet4DNESP3LO6BR
released
February 14th, 2022 at 3:03am
Source Publication
Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites.
Zou RS, Marin-Gonzalez A, et al., Nature cell biology 2022
ChIP-seq analysis for this dataset
Because of the nature of these experiments targeting very limited regions of induced damaged DNA the standard ChIP-seq analysis pipeline was unable to run on this dataset. The raw fastq files of the generated reads are provided. Please refer to the associated publication and contact the Ha lab if you need additional information.
Experiment Set Properties
Set Type
Replicate
Organism
Sample Type
immortalized cells
Sample
Experiment Type(s)
Modification Type
None
Treatment Type
Transient Transfection
Assay Details
Target: cas9 engineered reagent protein
4 Raw Files
Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSIZQIJ1P
Experiment
4DNEXMA1OH9Q
Pair
Biosample
4DNBSCYU8OA4
Experiment
4DNEXIBQJDAH
Pair