ExperimentSetReplicate

ExperimentSet4DNESOY2INBC
released
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RNA-seq on cerebellar granule neurons with etv1 sgRNA and etv1 variant2 rescue isolated using FANS at day 8 after in vivo electroporation from dCas9-KRAB mouse postnatal day 14

   August 5th, 2025 at 7:34pm

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
cerebellar granule neuron - 8 days old
Experiment Type(s) 
RNA-seq
Modification Type 
Crispr
Treatment Type 
Transient Transfection
Assay Details 
None

15 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXN6NKT9O
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIP5G1C7P
36.3m
35.23m
Experiment
4DNEXOGSWIU1
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIRFI2CMO
38.93m
38.11m
Experiment
4DNEX5EA7SFO
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIJCHCKQE
39m
38.14m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXN6NKT9O
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIGL1M4NA
11.99m
595.48k
Experiment
4DNEXOGSWIU1
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIGSOG7O4
12.62m
36.43k
Experiment
4DNEX5EA7SFO
Bio Rep 3, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIJJL8TFC
12.44m
47.4k