ExperimentSetReplicate

ExperimentSet4DNESOQD2GSC
released
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DNA Paint on HFF Htert cells with 3 loci

   November 27th, 2018 at 11:03pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:18:48016594-48189106 region, GRCh38:17:30541949-30739347 region, GRCh38:18:75525179-75695249 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:18:48016594-48189106 region targeted by Cy5-labeled BAC
ch02
GRCh38:17:30541949-30739347 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:18:75525179-75695249 region targeted by Alexa Fluor 488-labeled BAC

1 Processed File

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESOQD2GSC
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
File
File Type
File Size
Experiment
4DNEX4B4YVQW
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
-
-
-
Experiment
4DNEXQLRKRWJ
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
-
-
-
Experiment
4DNEXBD7SMQ4
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
-
-
-