ExperimentSetReplicate

ExperimentSet4DNESNTQV8XL
released
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RNA-seq on RUES2 iPSC cells - day 0 undifferentiated

   September 19th, 2022 at 4:13pm
Source Publication
Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiation.
Alavattam KG, Mitzelfelt KA, et al., Stem cell reports 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
stem cells
Sample 
RUES2
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEX2Y8O58V
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2
File
Read Positions (bam)
4DNFI6BV1I2M
56.8m
50.23m
Experiment
4DNEX9TQ4UM5
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2
File
Read Positions (bam)
4DNFIFAVX8ED
61.73m
50.28m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEX2Y8O58V
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2
File
Gene Expression (tsv)
4DNFI2M1FK6T
77.93m
746
Experiment
4DNEX9TQ4UM5
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2
File
Gene Expression (tsv)
4DNFI16BGQOW
74.01m
151.52k