ExperimentSetReplicate

ExperimentSet4DNESNHVPQ5M
released
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53BP1 ChIPseq on HEK293 cells - time 3h after Cas9-AluTA mgRNA delivery

   February 14th, 2022 at 3:03am
Source Publication
Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites.
Zou RS, Marin-Gonzalez A, et al., Nature cell biology 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HEK293 (Tier 2)
Experiment Type(s) 
ChIP-seq
Modification Type 
None
Treatment Type 
Transient Transfection
Assay Details 
Target: TP53BP1 protein

4 Processed Files

Quality Metrics

Experiment
For File
PCR Bottleneck Coefficient (PBC)
Nonredundant Read Fraction (NRF)
Filtered & Deduped Reads
Report
Details
Experiment
4DNEX2F231QW
Bio Rep 1, Tec Rep 1
ChIP-seq against TP53BP1 protein on HEK293 (Tier 2)
File
Read Positions (bed)
4DNFIYFXJAHO
0.73
0.74
8.36m