ExperimentSetReplicate

ExperimentSet4DNESNCMZ6EY
released

Replicates of RNA-seq on CRISPR/cas9-modified Patski cells (Del-hinge clone a) with mock treatment 1

   February 6th, 2018 at 9:57pm
Source Publication

Experiment Set Properties  


Set Type 
Replicate
Organism 
Biosource Type 
immortalized cell line
Biosource 
Patski
Experiment Type(s) 
Modification Type 
Crispr
Treatment Type 
None
Assay Details 
None

8 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXDJCOR84
Bio Rep 1, Tec Rep 1
RNA-seq on Patski
File
Read Positions (bam)
4DNFIUERIIBL
126.21m
110.17m
Experiment
4DNEX75EMIXX
Bio Rep 2, Tec Rep 1
RNA-seq on Patski
File
Read Positions (bam)
4DNFI5DL3Y8K
119.17m
104.35m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXDJCOR84
Bio Rep 1, Tec Rep 1
RNA-seq on Patski
File
Gene Expression (tsv)
4DNFI4D5AZDM
98.11m
122.48k
Experiment
4DNEX75EMIXX
Bio Rep 2, Tec Rep 1
RNA-seq on Patski
File
Gene Expression (tsv)
4DNFI2ZLYU38
94.03m
100.09k