ExperimentSetReplicate

ExperimentSet4DNESN7FCYAV
released

Replicates of RNA-seq on CRISPR/cas9-modified Patski cells (Del-hinge clone a) with 4uM 5-aza treatment

   February 6th, 2018 at 9:57pm
Source Publication

Experiment Set Properties  


Set Type 
Replicate
Organism 
Biosource Type 
immortalized cell line
Biosource 
Patski
Experiment Type(s) 
Modification Type 
Crispr
Treatment Type 
Chemical
Assay Details 
None

8 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXD1EHEPC
Bio Rep 1, Tec Rep 1
RNA-seq on Patski
File
Read Positions (bam)
4DNFIOJLET29
122.65m
107.91m
Experiment
4DNEX7487ISN
Bio Rep 2, Tec Rep 1
RNA-seq on Patski
File
Read Positions (bam)
4DNFIL1AUBT1
114.37m
100.93m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXD1EHEPC
Bio Rep 1, Tec Rep 1
RNA-seq on Patski
File
Gene Expression (tsv)
4DNFIH4G78HM
96.94m
46.58k
Experiment
4DNEX7487ISN
Bio Rep 2, Tec Rep 1
RNA-seq on Patski
File
Gene Expression (tsv)
4DNFISU6ZX8Q
89.91m
68.34k