ExperimentSetReplicate

ExperimentSet4DNESM83YJEU
released
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RNA-seq on cerebellar granule neurons with etv1 sgRNA and etv1 variant1 isolated using FANS at day 8 after in vivo electroporation from dCas9-KRAB mouse postnatal day 14

   August 5th, 2025 at 7:34pm

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
cerebellar granule neuron - 8 days old
Experiment Type(s) 
RNA-seq
Modification Type 
Crispr
Treatment Type 
Transient Transfection
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXVZGBBWE
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIVWDZ76Y
31.64m
30.96m
Experiment
4DNEX7Z6GKX2
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Read Positions (bam)
4DNFIYCL9MDX
33.01m
32.34m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXVZGBBWE
Bio Rep 1, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFI75I2QOW
10.4m
43.37k
Experiment
4DNEX7Z6GKX2
Bio Rep 2, Tec Rep 1
RNA-seq on cerebellar granule neuron - 8 days old
File
Gene Expression (tsv)
4DNFIZLDXRAI
10.75m
31.69k