ExperimentSetReplicate

ExperimentSet4DNESM2FEQNY
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single nucleus Hi-C on paternal pronuclei from Scc1 deletion

   June 22nd, 2018 at 5:38pm
Source Publication
A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
Gassler J, Brandao HB, et al., The EMBO journal 2017

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
animal zygote with Rad21 deletion
Experiment Type(s) 
sn-Hi-C
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

32 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSN5RNJUS
Bio Replicate 1
Experiment
4DNEX2D772MF
Tech Replicate 1
Pair
File
4DNFI6EYKA3P
1.77 GB
125
  Pass
27.28m
File
4DNFIOAH461T
1.85 GB
125
  Pass
27.28m
Biosample
4DNBSYRMRQY3
Bio Replicate 2
Experiment
4DNEX2HKCXY8
Tech Replicate 1
Pair
File
4DNFIFPSFGXU
1.43 GB
125
  Pass
22.84m
File
4DNFIVYHERKR
1.45 GB
125
  Pass
22.84m
Biosample
4DNBS3QRPGAD
Bio Replicate 3
Experiment
4DNEXG3J2XQG
Tech Replicate 1
Pair
File
4DNFIRERP36O
1.41 GB
125
  Pass
23.08m
File
4DNFISDSVUDK
1.47 GB
125
  Pass
23.08m
Show 13 More Biosamples with 13 Experiments