ExperimentSetReplicate

ExperimentSet4DNESLSWSS47
released
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SLAM-seq on G1 stage 30 min DMSO treated dTAG-NIPBL clone D7 - 15 min 4sU labeling

   October 18th, 2024 at 2:36pm
Source Publication
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay TM, Pant A, et al., bioRxiv 2024

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
dTAG-NIPBL hTERT-RPE-1 - clone D7
Experiment Type(s) 
SLAM-seq
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
None

6 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBS175Y27N
Bio Replicate 1
Experiment
4DNEX42WTA4A
Tech Replicate 1
Pair
File
4DNFIY3KCV85
5.66 GB
101
  Pass
113.52m
File
4DNFIRN7S5S3
5.74 GB
101
  Pass
113.52m
Biosample
4DNBS4THG7CG
Bio Replicate 2
Experiment
4DNEXLJ2O5H5
Tech Replicate 1
Pair
File
4DNFIP63PFYM
6.75 GB
101
  Pass
136.19m
File
4DNFIOTNEQXK
6.82 GB
101
  Pass
136.19m
Biosample
4DNBSIBI1CXP
Bio Replicate 3
Experiment
4DNEXVCD9B5T
Tech Replicate 1
Pair
File
4DNFIQ753L16
6.95 GB
101
  Pass
139.84m
File
4DNFIAXIBMPE
7.11 GB
101
  Pass
139.84m