ExperimentSetReplicate

ExperimentSet4DNESLQDCU1A
released
View JSON

RNA-seq on RUES2 iPSC cells - differentiation day 14 endothelial cells

   September 19th, 2022 at 4:13pm
Source Publication
Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiation.
Alavattam KG, Mitzelfelt KA, et al., Stem cell reports 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
RUES2 differentiated to endothelial cell
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXCBSYZBN
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial cell
File
Read Positions (bam)
4DNFI31823L4
83.81m
72.76m
Experiment
4DNEXMH7P7QL
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial cell
File
Read Positions (bam)
4DNFI3GZ5FEH
60.2m
54.89m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXCBSYZBN
Bio Rep 1, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial cell
File
Gene Expression (tsv)
4DNFIQFCADXR
104.91m
116.84k
Experiment
4DNEXMH7P7QL
Bio Rep 2, Tec Rep 1
RNA-seq on RUES2 differentiated to endothelial cell
File
Gene Expression (tsv)
4DNFIXY383IQ
75.4m
5.83k