ExperimentSetReplicate

ExperimentSet4DNESK6LGIHX
released
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RNA-seq on F121-6 cells

   July 26th, 2018 at 3:56pm
Source Publication
Allele-specific control of replication timing and genome organization during development.
Rivera-Mulia JC, Dimond A, et al., Genome research 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
F121-6-CASTx129
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

8 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXS8E8M56
Bio Rep 1, Tec Rep 1
RNA-seq on F121-6-CASTx129
File
Read Positions (bam)
4DNFIEACR73A
3.2m
2.51m
Experiment
4DNEXPMDSZ2L
Bio Rep 2, Tec Rep 1
RNA-seq on F121-6-CASTx129
File
Read Positions (bam)
4DNFIMQO8NV4
3.53m
2.75m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXS8E8M56
Bio Rep 1, Tec Rep 1
RNA-seq on F121-6-CASTx129
File
Gene Expression (tsv)
4DNFIUINCOD6
6
4
Experiment
4DNEXPMDSZ2L
Bio Rep 2, Tec Rep 1
RNA-seq on F121-6-CASTx129
File
Gene Expression (tsv)
4DNFIFKLXPZG
3
2