ExperimentSetReplicate

ExperimentSet4DNESJB8A6CK
released
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Replicates of P9_S fraction Repliseq on HCT116 cells - cells were grown, BrdU labeled and FACS sorted

   March 10th, 2021 at 12:07am
Source Publication
Cohesin-mediated loop anchors confine the locations of human replication origins.
Emerson DJ, Zhao PA, et al., Nature 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HCT116 (Tier 2)
Experiment Type(s) 
Multi-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: P9 of 17 fractions

2 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEX757FFGI
Bio Rep 1, Tec Rep 1
Multi-stage Repli-seq on HCT116 (Tier 2) S-phase P9
File
Alignments (bam)
4DNFICC6QLZE
26.4m
2.928%