ExperimentSetReplicate

ExperimentSet4DNESIUID3Z2
released

Replicate Set of sciHi-C on F121-6 mESC cells Timecourse #1 - day 0 of embryoid body differentiation - this Replicate Set is derived from experiments performed on pooled mixtures of F121-6 cells undergoing differentiation to embryoid bodies. Cells are harvested on specific days over the time course of differentiation. The raw files linked to the experiments in this set will contain reads from multiple time points and barcode information needs to used to obtain cell specific reads - see details in the experiment descriptions. Processed files for this set will be specific to day 0 (undifferentiated) cells.

   November 7th, 2020 at 2:30am

Assay Description  



Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
stem cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

12 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Notes
Biosample
4DNBSGVAENH8
Bio Replicate 1
Experiment
4DNEXMN3ZJ4X
Tech Replicate 1
Pair 1
41.91 GB
250
  Pass
221.74m
38.89 GB
250
  Pass
221.74m
Pair 2
38.13 GB
250
  Pass
199.65m
35.09 GB
250
  Pass
199.65m
Biosample
4DNBS3GDA65Y
Bio Replicate 2
Experiment
4DNEXMNAHJPG
Tech Replicate 1
Pair 1
17.92 GB
251
  Pass
140.54m
17.89 GB
251
  Pass
140.54m
Pair 2
18.01 GB
251
  Pass
140.53m
17.89 GB
251
  Pass
140.53m
Pair 3
12.67 GB
251
  Pass
98.42m
12.91 GB
251
  Pass
98.42m
Pair 4
12.72 GB
251
  Pass
98.38m
12.9 GB
251
  Pass
98.38m