ExperimentSetReplicate

ExperimentSet4DNESIKGI39T
released

Replicate Set of sciHi-C on H1-ESC cells - this Replicate Set is derived from experiments performed on a pure H1-ESC culture (Bio replicate 1) and a pooled mixture of H1-ESC cells and HFFc6 cells (Bio replicate 2). Bioreplicate 2 raw files will contain reads from both cell types. Barcode information needs to used to obtain line specific reads. Processed files for this set will be specific to H1-ESC cells.

   February 5th, 2018 at 8:54pm
Source Publication

Assay Description  



Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
stem cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

16 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSOB39EE9
Bio Replicate 1
Experiment
4DNEXJLO3SIH
Tech Replicate 1
Pair 1
12.74 GB
250
  Pass
63.24m
13.24 GB
250
  Pass
63.24m
Pair 2
21.63 GB
250
  Pass
107.3m
22.39 GB
250
  Pass
107.3m
Experiment
4DNEXJD1GLV9
Tech Replicate 2
Pair 1
10.36 GB
250
  Pass
50.7m
10.67 GB
250
  Pass
50.7m
Pair 2
14.29 GB
250
  Pass
69.87m
14.66 GB
250
  Pass
69.87m
Biosample
4DNBSP9E9RLH
Bio Replicate 2
Experiment
4DNEXSXHFNQU
Tech Replicate 1
Pair 1
13.65 GB
250
  Pass
68.17m
14.34 GB
250
  Pass
68.17m
Pair 2
14.89 GB
250
  Pass
73.84m
15.57 GB
250
  Pass
73.84m
Experiment
4DNEXSR13BV7
Tech Replicate 2
Pair 1
7.54 GB
250
  Pass
39.27m
7.97 GB
250
  Pass
39.27m
Pair 2
26.6 GB
250
  Pass
128.84m
27.46 GB
250
  Pass
128.84m