ExperimentSetReplicate

ExperimentSet4DNESIJ7UN4H
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RNA FISH of Hbb-b1 intronic regions on empty vector infected, vector positive sorted, 9h differentiated cells

   September 14th, 2018 at 4:58pm

Data Usage Guidelines  

Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
Stable Transfection
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCm38:7:103826534-103827928 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:7:103826534-103827928 mouse region targeted by Alexa Fluor 594-labeled custom oligos

6 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXX7XE4Y3
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIF3A197B
csv
26.54 kB
File
4DNFIJPPRZ12
coordinates (csv)
3.15 kB
Experiment
4DNEXMGPALW5
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFI4QM8Y31
csv
22.28 kB
File
4DNFINE7I6UK
coordinates (csv)
3.59 kB
Experiment
4DNEXEHMLERL
Bio Rep 3, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIJVRD6FZ
csv
32.24 kB
File
4DNFIDR88X88
coordinates (csv)
6.2 kB