ExperimentSetReplicate

ExperimentSet4DNESI93P5WH
released
View JSON

single nucleus Hi-C on maternal pronuclei from Wapl control

   June 22nd, 2018 at 5:38pm
Source Publication
A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
Gassler J, Brandao HB, et al., The EMBO journal 2017

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
animal zygote
Experiment Type(s) 
sn-Hi-C
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: DpnII

44 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSC8V5J4M
Bio Replicate 1
Experiment
4DNEXF9UPPEC
Tech Replicate 1
Pair
File
4DNFI3JIY3A7
1.32 GB
125
  Pass
21.94m
File
4DNFIVVCDLTK
1.35 GB
125
  Pass
21.94m
Biosample
4DNBSB3RD95T
Bio Replicate 2
Experiment
4DNEX48KGXI8
Tech Replicate 1
Pair
File
4DNFI3OZ14QU
1.19 GB
125
  Pass
19.73m
File
4DNFIQ568ND1
1.19 GB
125
  Pass
19.73m
Biosample
4DNBSO7X55DK
Bio Replicate 3
Experiment
4DNEXQGA8LT4
Tech Replicate 1
Pair 1
File
4DNFIUH6LELN
174.71 MB
35-76
  Pass
3.58m
File
4DNFIG3DTKY9
181.97 MB
35-76
  Pass
3.58m
Pair 2
File
4DNFIXPGBOC8
174.31 MB
35-76
  Pass
3.55m
File
4DNFI68ZSN9R
181.41 MB
35-76
  Pass
3.55m
Pair 3
File
4DNFISOADUS7
175.15 MB
35-76
  Pass
3.62m
File
4DNFIM7PN7SV
182.62 MB
35-76
  Pass
3.62m
Pair 4
File
4DNFIAVBI48R
173.34 MB
35-76
  Pass
3.58m
File
4DNFIYUUIZ6E
180.8 MB
35-76
  Pass
3.58m
Show 4 More Biosamples with 4 Experiments