ExperimentSetReplicate

ExperimentSet4DNESHGEXAOL
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Multiplexed FISH in K562 cell line at MYC locus using a customscope microscope technique

   February 4th, 2025 at 9:45pm
Source Publication
Single-cell chromatin state transitions during epigenetic memory formation.
Fujimori T, Rios-Martinez C, et al., bioRxiv : the preprint server for biology 2023

Note on FOF-CT file format  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
K562
Experiment Type(s) 
multiplexed FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, MYC region
Channel
Imaging Rounds
Path
 
ch00
-
DAPI staining
ch01
1-48
48 10-kb around MYC locus targeted by by Cy5-labeled imaging oligos
ch02
1-48
48 10-kb around MYC locus targeted by Cy3-labeled fiducial oligos.

1 Processed File

Experiment
File
File Type
File Size
Experiment
4DNEXQWNDFU3
Bio Rep 1, Tec Rep 1
multiplexed FISH on K562
File
4DNFIXZ8ZO5B
FOF-CT - DNA-spot/trace core (csv)
3.14 MB