ExperimentSetReplicate

ExperimentSet4DNESFRAOHQT
released

ATAC-seq on primary motor cortex from mouse - subsection 5D

   April 12th, 2024 at 11:40pm
Source Publication

Track color key file for aggregated peaks  


NOTE This bed file contains non-redundant peaks aggregated from multiple donors. Different track colors are used to represent peaks for specific cell type. The information on track colors and associted cell type can be accessed via a key file here

Aggregated non-redundant peaks  


NOTE Non-redundant peaks aggregated from multiple donors in bed format is provided as a supplementary file. Peaks of a specific cell type are represented using different track colors which can be visualized using HiGlass. Additionally, a zipped folder containing individual bed files specific for each cell type is also provided. The information on track colors and associated cell type can be accessed via a key file here


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
tissue
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

18 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSKOTGJDP
Bio Replicate 1
Experiment
4DNEXBR6N96B
Tech Replicate 1
Grp 1
48.69 GB
101
  Pass
982.95m
48.95 GB
101
  Pass
982.95m
15.17 GB
24
  Pass
982.95m
Grp 2
56.96 GB
101
  Pass
1.16 billion
56.82 GB
101
  Pass
1.16 billion
17.58 GB
24
  Pass
1.16 billion
Biosample
4DNBSAVL1YY9
Bio Replicate 2
Experiment
4DNEX95MTDQS
Tech Replicate 1
Grp 1
6.22 GB
101
  Pass
126.21m
6.15 GB
101
  Pass
126.21m
2.01 GB
24
  Pass
126.21m
Grp 2
7.12 GB
101
  Pass
148.28m
7.11 GB
101
  Pass
148.28m
2.31 GB
24
  Pass
148.28m
Grp 3
16.86 GB
101
  Pass
339.17m
16.86 GB
101
  Pass
339.17m
5.39 GB
24
  Pass
339.17m
Grp 4
16.81 GB
101
  Pass
338.57m
16.77 GB
101
  Pass
338.57m
5.35 GB
24
  Pass
338.57m