ExperimentSetReplicate

ExperimentSet4DNESFMEOEHW
released
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Replicates of P9_S fraction ReReplicates of Pliseq on H1-hESC Tier 1 cells - cells were grown, BrdU labeled and FACS sorted

   March 21st, 2019 at 8:42pm
Source Publication
High-resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells.
Zhao PA, Sasaki T, et al., Genome biology 2020

Note: Replaced Item - 4DNESFMEOEHW  

This experiment set supercedes 4DNES9OZNM6T because a new biological replicate was added.

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
stem cells
Sample 
H1-hESC (Tier 1)
Experiment Type(s) 
Multi-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: P9 of 16 fractions

4 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEXTM3PBS3
Bio Rep 1, Tec Rep 1
Multi-stage Repli-seq on H1-hESC (Tier 1) S-phase P9
File
Alignments (bam)
4DNFIDL87H1F
30.25m
3.551%
Experiment
4DNEX7T7A9QP
Bio Rep 2, Tec Rep 1
Multi-stage Repli-seq on H1-hESC (Tier 1) S-phase P9
File
Alignments (bam)
4DNFI8MTWG8X
15.49m
2.299%